ADHDgene Database

SNP Report

Basic Info

Name	rs4393297 dbSNP Ensembl
Location	Chr11:17943664(Fwd)
Variant Alleles	C/G
Ancestral Allele	C
Functional Annotation	NMD_transcript_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000527494; ENST00000525422; ENST00000532546) intron_variant(ENST00000528369; ENST00000527494; ENST00000265965; ENST00000525422; ENST00000529440; ENST00000529151; ENST00000532546; ENST00000528200; ENST00000525920; ENST00000533241; ENST00000532265; ENST00000525168) nc_transcript_variant(ENST00000528369; ENST00000529440; ENST00000525168)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location
SERGEF	secretion regulating guanine nucleotide exchange factor	11p14.3

SNPs in LD with rs4393297 (count: 2) View in gBrowse (chr11:17943664..18059292 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs1800532	NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant	3(1/2/0)	0.96[CEU]; 0.894[GIH]; 0.874[TSI]
rs169806	NMD_transcript_variant; intron_variant	1(0/1/0)	0.959[CEU]