ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs3758653 dbSNP Ensembl
Location chr11:636399(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000176183; ENST00000528733)
No. of Studies 2 (significant: 1; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Lasky-Su J, 2007 Unadjusted FBAT-PC P-value=0.302, Adjusted FBAT-PC P-value=0...... Unadjusted FBAT-PC P-value=0.302, Adjusted FBAT-PC P-value=0.503 under Recessive genetic model; Unadjusted FBAT-PC P-value=0.573, Adjusted FBAT-PC P-value=0.572 under Dominant genetic model. More... No association with ADHD was found No association with ADHD was found Non-significant
Oades RD, 2008 P-value=0.008178; FDR P-value=0.08178 for behavioral impulsi...... P-value=0.008178; FDR P-value=0.08178 for behavioral impulsivity More... attained nominal significance for an association with impuls...... attained nominal significance for an association with impulsive behavioral aggression More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs3758653 (count: 4) View in gBrowse (chr11:605856..636399 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 4)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014