ADHDgene Database

SNP Report

Basic Info

Name	rs3742261 dbSNP Ensembl
Location	Chr13:42703682(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	intron_variant; splice_region_variant.
Consequence to Transcript	intron_variant(ENST00000337343; ENST00000379274; ENST00000540693; ENST00000261491) splice_region_variant(ENST00000337343; ENST00000540693; ENST00000379274; ENST00000261491)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
DGKH	diacylglycerol kinase, eta	13q13.3	1(1/0/0)

SNPs in LD with rs3742261 (count: 3) View in gBrowse (chr13:42703682..42734894 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs9525584	intron_variant; nc_transcript_variant	1(0/1/0)	0.822[CEU]
rs994856	intron_variant; upstream_gene_variant	1(1/0/0)	0.855[ASW]; 1.0[CEU]; 0.911[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.839[LWK]; 1.0[MEX]; 0.891[MKK]; 1.0[TSI]
rs9525580	intron_variant; nc_transcript_variant	1(1/0/0)	0.942[YRI]