ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs3100616 dbSNP Ensembl
Location Chr2:232913682(Fwd)
Variant Alleles G/A
Ancestral Allele A
Functional Annotation NMD_transcript_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000390005; ENST00000445090; ENST00000433430)
intron_variant(ENST00000409401; ENST00000273009; ENST00000390005; ENST00000445090; ENST00000441279; ENST00000464554; ENST00000409307; ENST00000470087; ENST00000325385; ENST00000360410; ENST00000433430)
nc_transcript_variant(ENST00000464554; ENST00000470087)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs3100616 (count: 1) View in gBrowse (chr2:232798723..232913682 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014