ADHDgene Database

SNP Report

Basic Info

Name	rs2934971 dbSNP Ensembl
Location	Chr17:37854507(Fwd)
Variant Alleles	G/T
Ancestral Allele	T
Functional Annotation	downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000584014) intron_variant(ENST00000578199; ENST00000584601; ENST00000406381) upstream_gene_variant(ENST00000584856; ENST00000584908; ENST00000582788; ENST00000582648; ENST00000269571; ENST00000584450; ENST00000578373; ENST00000445658; ENST00000578709; ENST00000541774; ENST00000540147)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location
PGAP3	post-GPI attachment to proteins 3	17q21.2
ERBB2	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	17q11.2-q12

SNPs in LD with rs2934971 (count: 1) View in gBrowse (chr17:37828496..37854507 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2952151	3_prime_UTR_variant; downstream_gene_variant; nc_transcript_variant; non_coding_exon_variant	1(0/1/0)	0.901[CEU]; 0.83[CHB]; 0.899[CHD]; 0.971[GIH]; 0.875[MEX]; 0.842[TSI]