ADHDgene Database

SNP Report

Basic Info

Name	rs2920695 dbSNP Ensembl
Location	Chr2:120318903(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000413057; ENST00000295220; ENST00000594033) downstream_gene_variant(ENST00000463985) intron_variant(ENST00000413057; ENST00000295220; ENST00000594033; ENST00000442513; ENST00000594371; ENST00000602047; ENST00000488358; ENST00000413369; ENST00000598644) nc_transcript_variant(ENST00000488358)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
PCDP1	primary ciliary dyskinesia protein 1 [Validated RefSeq, protein coding gene]	2q14.2	1(0/0/1)

SNPs in LD with rs2920695 (count: 1) View in gBrowse (chr2:120318903..120321817 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2587695	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant	1(0/0/1)	0.889[CEU]; 1.0[CHB]; 1.0[JPT]