ADHDgene Database

SNP Report

Basic Info

Name	rs2293487 dbSNP Ensembl
Location	Chr7:73108310(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000421744; ENST00000430446; ENST00000436944; ENST00000432522; ENST00000428163; ENST00000430270) downstream_gene_variant(ENST00000478670; ENST00000441822; ENST00000487006) intron_variant(ENST00000421744; ENST00000430446; ENST00000423166; ENST00000436944; ENST00000442099; ENST00000432522; ENST00000453316; ENST00000423497; ENST00000463307; ENST00000428163; ENST00000430270; ENST00000265758; ENST00000496153) nc_transcript_variant(ENST00000463307; ENST00000496153) upstream_gene_variant(ENST00000471215)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location
WBSCR22	Williams Beuren syndrome chromosome region 22	7q11.23

SNPs in LD with rs2293487 (count: 2) View in gBrowse (chr7:73108310..73125263 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs941298	intron_variant; nc_transcript_variant; upstream_gene_variant	1(1/0/0)	1.0[CEU]; 0.888[CHB]; 1.0[JPT]; 0.956[MEX]; 0.975[TSI]
rs4363087	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(1/0/0)	0.831[CEU]