ADHDgene Database

SNP Report

Basic Info

Name	rs1918172 dbSNP Ensembl
Location	Chr2:156888500(Fwd)
Variant Alleles	C/G
Ancestral Allele	G
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000450741)
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Lasky-Su J, 2008			P-value=5.18E-06 under Additive model for Total ADHD symptom...... P-value=5.18E-06 under Additive model for Total ADHD symptom count More...	association finding with P-value association finding with P-value	Trend

SNP related genes (count: 0)

SNPs in LD with rs1918172 (count: 11) View in gBrowse (chr2:156862613..156895806 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs6748811	intron_variant; nc_transcript_variant; non_coding_exon_variant	0.806[CHB]; 0.805[JPT]
rs1918173	upstream_gene_variant	0.863[CHB]; 0.822[CHD]; 0.927[JPT]
rs2882618	upstream_gene_variant	1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 0.879[GIH]; 1.0[JPT]; 0.878[MEX]; 0.85[MKK]; 0.946[TSI]
rs11680065		0.806[CHB]; 0.817[GIH]; 0.805[JPT]
rs4664790	downstream_gene_variant	0.806[CHB]; 0.805[JPT]
rs2177952		1.0[CHB]; 0.877[GIH]; 1.0[JPT]
rs1534261	upstream_gene_variant	0.863[CHB]; 0.822[CHD]; 0.927[JPT]
rs1534260	upstream_gene_variant	0.877[ASW]; 0.866[CEU]; 0.928[CHB]; 1.0[CHD]; 0.863[GIH]; 1.0[JPT]; 0.907[LWK]; 1.0[MEX]; 0.865[MKK]; 1.0[YRI]
rs1110075	downstream_gene_variant; upstream_gene_variant	0.863[CHB]; 0.818[CHD]; 0.927[JPT]
rs7371289	intron_variant; nc_transcript_variant	0.923[JPT]
rs7570959	downstream_gene_variant; upstream_gene_variant	0.863[CHB]; 0.822[CHD]; 0.927[JPT]