ADHDgene Database

SNP Report

Basic Info

Name	rs1866295 dbSNP Ensembl
Location	Chr12:104186946(Fwd)
Variant Alleles	G/T
Ancestral Allele	G
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; synonymous_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000415849) downstream_gene_variant(ENST00000465502) synonymous_variant(ENST00000415849; ENST00000392876) upstream_gene_variant(ENST00000474268)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
NT5DC3	5'-nucleotidase domain containing 3	12q22-q23.1	1(0/0/1)

SNPs in LD with rs1866295 (count: 1) View in gBrowse (chr12:104186946..104192824 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs4964805	intron_variant; nc_transcript_variant	1(0/0/1)	1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 0.885[CHD]; 1.0[GIH]; 0.953[JPT]; 0.97[LWK]; 0.955[MEX]; 0.926[MKK]; 1.0[TSI]; 1.0[YRI]