ADHDgene Database

SNP Report

Basic Info

Name	rs1513214 dbSNP Ensembl
Location	Chr3:39560265(Fwd)
Variant Alleles	T/A
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000424090; ENST00000452959; ENST00000442631) downstream_gene_variant(ENST00000383754; ENST00000311042) intron_variant(ENST00000396228; ENST00000479860; ENST00000424090; ENST00000452959; ENST00000442631) nc_transcript_variant(ENST00000479860)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MOBP	myelin-associated oligodendrocyte basic protein	3p21.33	1(0/0/1)

SNPs in LD with rs1513214 (count: 1) View in gBrowse (chr3:39555580..39560265 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs864643	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant	1(0/0/1)	1.0[CEU]; 0.825[CHB]; 0.884[JPT]; 0.887[YRI]