ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1490046 dbSNP Ensembl
Location chr5:173956047(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000504512; ENST00000507361; ENST00000510234; ENST00000515513)
intron_variant(ENST00000506862)
nc_transcript_variant(ENST00000506862)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Stergiakouli E., 2012 A/G A P=0.0000287, OR=1.56, 95% CI=1.27-1.92 P=0.0000287, OR=1.56, 95% CI=1.27-1.92 One of the top 35 independent SNP in this ADHD GWAS. One of the top 35 independent SNP in this ADHD GWAS. Trend

SNP related genes (count: 0)

SNPs in LD with rs1490046 (count: 1) View in gBrowse (chr5:173956047..173959218 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 1)