ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12453316 dbSNP Ensembl
Location chr17:71516059(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript downstream_gene_variant(ENST00000583547)
intron_variant(ENST00000388726; ENST00000392650)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Lesch KP, 2008 ANOVA P-value=1.72E-05, Mean of ranks=62 ANOVA P-value=1.72E-05, Mean of ranks=62 one of the top 30 single SNPs located in gene regions (inclu...... one of the top 30 single SNPs located in gene regions (including 100kb of flanking sequences) ranked according to the mean rank calculated across three statistics More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs12453316 (count: 3) View in gBrowse (chr17:71512799..71516096 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 3)