ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs11686538 dbSNP Ensembl
Location chr2:225818564(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant; NMD_transcript_variant.
Consequence to Transcript intron_variant(ENST00000258390; ENST00000435582; ENST00000471810; ENST00000492369)
nc_transcript_variant(ENST00000471810; ENST00000492369)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Stergiakouli E., 2012 G/A G P=0.0000127, OR=0.74, 95% CI=0.64-0.84 P=0.0000127, OR=0.74, 95% CI=0.64-0.84 One of the top 28 independent SNP in this ADHD GWAS. One of the top 28 independent SNP in this ADHD GWAS. Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs11686538 (count: 21) View in gBrowse (chr2:225774390..225831586 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 21)