ADHDgene Database

SNP Report

Basic Info

Name	rs1062966 dbSNP Ensembl
Location	Chr6:41652604(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	downstream_gene_variant; synonymous_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000416140; ENST00000419396; ENST00000394283; ENST00000494822; ENST00000419574) synonymous_variant(ENST00000406563; ENST00000230323; ENST00000373033; ENST00000343317; ENST00000358871; ENST00000420312; ENST00000403298) upstream_gene_variant(ENST00000597468)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
TFEB	transcription factor EB	6p21	1(0/0/1)

SNPs in LD with rs1062966 (count: 1) View in gBrowse (chr6:41650736..41652604 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2842643	downstream_gene_variant; upstream_gene_variant	1(0/0/1)	1.0[ASW]; 1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.955[MEX]; 1.0[TSI]; 0.919[YRI]