ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1058808 dbSNP Ensembl
Location Chr17:37884037(Fwd)
Variant Alleles C/G/-
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; feature_truncation; frameshift_variant; missense_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000578373; ENST00000584450)
NMD_transcript_variant(ENST00000578373)
downstream_gene_variant(ENST00000582818; ENST00000578630; ENST00000583038; ENST00000580074; ENST00000394231; ENST00000582963; ENST00000580969; ENST00000474210; ENST00000469568; ENST00000577810; ENST00000498164)
feature_truncation(ENST00000578373; ENST00000584450; ENST00000584601; ENST00000445658; ENST00000269571; ENST00000541774; ENST00000540147; ENST00000406381)
frameshift_variant(ENST00000269571; ENST00000445658; ENST00000584601; ENST00000541774; ENST00000540147; ENST00000406381)
missense_variant(ENST00000445658; ENST00000584601; ENST00000269571; ENST00000541774; ENST00000540147; ENST00000406381)
upstream_gene_variant(ENST00000584888)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 4)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 4)


SNPs in LD with rs1058808 (count: 1) View in gBrowse (chr17:37828496..37884037 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014