ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs10042486 dbSNP Ensembl
Location chr5:63261329(Fwd)
Variant Alleles C/T
Ancestral Allele T
Functional Annotation intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000502882)
upstream_gene_variant(ENST00000323865; ENST00000506598)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Park, Y. H.,2013 T/C allelic chi-square tests, P-value=0.041 (OR=1.55; 95%CI=1.02...... allelic chi-square tests, P-value=0.041 (OR=1.55; 95%CI=1.02-2.36; X2=2.04); genotypic chi-square tests P-value=0.024 (OR=4.48; 95%CI=1.22-16.45; X2=2.26). More... There was a significant difference in the frequency between ...... There was a significant difference in the frequency between the cases and controls. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs10042486 (count: 22) View in gBrowse (chr5:63222781..63420131 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 22)