ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Region Report

Basic Info

Region Name	5p
Chromosome Position	chr5:0-48400000
#studies (significant/non-significant/trend)	1(1/0/0)

Region related studies (count: 1)

Reference	Markers	Statistical Values	Author Comments	Result of Statistical Analysis
Hebebrand J, 2006	D5S1981; D5S2005; D5S678; DAT1 VNTR; D5S1970; D5S417; D5S2849; D5S406; D5S1953; D5S807; D5S667; D5S817; D5S1991; D5S416; D5S486; D5S2845; D5S813; D5S502; D5S2848; D5S661; D5S1470; D5S674; D5S663; D5S1457; D5S461	LOD score=2.59; LOD score=3.37 for symptoms of inattention; ...... LOD score=2.59; LOD score=3.37 for symptoms of inattention; HLOD=4.75 under a dominant model More...	identified nominal evidence for linkage identified nominal evidence for linkage	Significant

Region related genes (count: 251)

Literature-origin genes (count: 6)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
GDNF	glial cell derived neurotrophic factor	5p13.1-p12	2(1/1/0)
FGF10	fibroblast growth factor 10	5p13-p12	1(0/1/0)
SLC6A3	solute carrier family 6 (neurotransmitter transporter), member 3	5p15.3	70(43/26/1)
TRIO	trio Rho guanine nucleotide exchange factor	5p14-p15.1	1(0/0/1)
SLC1A3	solute carrier family 1 (glial high affinity glutamate transporter), member 3	5p13	2(1/1/0)
HCN1	hyperpolarization activated cyclic nucleotide-gated potassium channel 1	5p12	1(0/1/0)

Genes from other sources (count: 245)

Approved Symbol	Approved Name	Location
MRPS30	mitochondrial ribosomal protein S30	5q11
INTS6P1	integrator complex subunit 6 pseudogene 1	5p13.1
GCNT1P2	glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2	5p14.3
RNU6-738P	RNA, U6 small nuclear 738, pseudogene	5p14.1
SUCLG2P4	succinate-CoA ligase, GDP-forming, beta subunit pseudogene 4	5p13.3
C5orf42	chromosome 5 open reading frame 42	5p13.2
DAP	death-associated protein	5p15.2
EGFLAM-AS4	EGFLAM antisense RNA 4	5p13.2
MIR4457	microRNA 4457	5
RPL21P54	ribosomal protein L21 pseudogene 54	5p13.2
EEF1A1P19	eukaryotic translation elongation factor 1 alpha 1 pseudogene 19	5p12
RPL37	ribosomal protein L37	5p13.1
CARD6	caspase recruitment domain family, member 6	5p13.1
RPL32P14	ribosomal protein L32 pseudogene 14	5p14.3
MARCH11	membrane-associated ring finger (C3HC4) 11	5p15.1
RXFP3	relaxin/insulin-like family peptide receptor 3	5p15.1-p14
ZFR	zinc finger RNA binding protein	5p15.2
NDUFS6	NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	5p15.33
LINC01021	long intergenic non-protein coding RNA 1021	5p14.1
UQCRBP3	ubiquinol-cytochrome c reductase binding protein pseudogene 3	5p15.2
RPS4XP6	ribosomal protein S4X pseudogene 6	5p13.2
C7	complement component 7	5p13.1
MIR4635	microRNA 4635	5
PRDM9	PR domain containing 9	5p14.2
TARS	threonyl-tRNA synthetase	5p13.2
BRIX1	BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	5p13.2
PMCHL1	pro-melanin-concentrating hormone-like 1, pseudogene	5p14.3
TRIP13	thyroid hormone receptor interactor 13	5p15
SUB1	SUB1 homolog (S. cerevisiae)	5p13.3
TTC23L	tetratricopeptide repeat domain 23-like	5p13.2
GDNF-AS1	GDNF antisense RNA 1 (head to head)	5p13.2
AIG1P1	androgen-induced 1 pseudogene 1	5p13.1
DNAH5	dynein, axonemal, heavy chain 5	5p15.2
CCDC152	coiled-coil domain containing 152	5p12
LINC01020	long intergenic non-protein coding RNA 1020	5p15.32
FAM134B	family with sequence similarity 134, member B	5p15.1
RN7SL572P	RNA, 7SL, cytoplasmic 572, pseudogene	5p14.3
CAPSL	calcyphosine-like	5p13.2
NNT-AS1	NNT antisense RNA 1	5p12
LIFR	leukemia inhibitory factor receptor alpha	5p13-p12
RN7SKP73	RNA, 7SK small nuclear pseudogene 73	5p15.32
MIR4637	microRNA 4637	5
UGT3A1	UDP glycosyltransferase 3 family, polypeptide A1	5p13.2
CDH9	cadherin 9, type 2 (T1-cadherin)	5p14
CDH10	cadherin 10, type 2 (T2-cadherin)	5p14.2
CDH12	cadherin 12, type 2 (N-cadherin 2)	5p14.3
LMBRD2	LMBR1 domain containing 2	5p13.2
DCAF13P2	DDB1 and CUL4 associated factor 13 pseudogene 2	5p15.1
MTND6P2	MT-ND6 pseudogene 2	5p15.31
CEP72	centrosomal protein 72kDa	5p15.33
HNRNPKP5	heterogeneous nuclear ribonucleoprotein K pseudogene 5	5p15.2
RNU6-429P	RNA, U6 small nuclear 429, pseudogene	5p15.2
MIR887	microRNA 887	5p15.1
LINC01018	long intergenic non-protein coding RNA 1018	5p15.31
SEPP1	selenoprotein P, plasma, 1	5q31
PDZD2	PDZ domain containing 2	5p14.1
ADAMTS16	ADAM metallopeptidase with thrombospondin type 1 motif, 16	5p15
NIPBL	Nipped-B homolog (Drosophila)	5p13.2
LPCAT1	lysophosphatidylcholine acyltransferase 1	5p15.33
FYB	FYN binding protein	5p13.1
PTGER4	prostaglandin E receptor 4 (subtype EP4)	5p13.1
MROH2B	maestro heat-like repeat family member 2B	5p13.1
NPR3	natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	5p14-p13
MTRR	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	5p15.31
RNU1-76P	RNA, U1 small nuclear 76, pseudogene	5p15.31
LSP1P3	lymphocyte-specific protein 1 pseudogene 3	5p13.3
C1QTNF3	C1q and tumor necrosis factor related protein 3	5p13
GCSHP1	glycine cleavage system protein H (aminomethyl carrier) pseudogene 1	5p13.1
GHR	growth hormone receptor	5p14-p12
C5orf49	chromosome 5 open reading frame 49	5p15.31
GOLGA5P1	golgin A5 pseudogene 1	5p13.1
SLC45A2	solute carrier family 45, member 2	5p13.3
RPL30P7	ribosomal protein L30 pseudogene 7	5p15.2
IRX1	iroquois homeobox 1	5p15.33
RPS23P5	ribosomal protein S23 pseudogene 5	5p15.2
SDHAP3	succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3	5p15.33
OSMR	oncostatin M receptor	5p13.2
ROPN1L-AS1	ROPN1L antisense RNA 1	5p15.2
CDH6	cadherin 6, type 2, K-cadherin (fetal kidney)	5p13.3
RNU7-75P	RNA, U7 small nuclear 75 pseudogene	5p13.2
FAM105B	family with sequence similarity 105, member B	5p15.2
ADCY2	adenylate cyclase 2 (brain)	5p15.3
CCDC127	coiled-coil domain containing 127	5p15.33
RPL29P12	ribosomal protein L29 pseudogene 12	5p12
ANKRD33B	ankyrin repeat domain 33B	5p15.2
RN7SKP79	RNA, 7SK small nuclear pseudogene 79	5p15.31
SKP2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase	5p13
TAS2R1	taste receptor, type 2, member 1	5p15
C9	complement component 9	5p14-p12
GOLPH3	golgi phosphoprotein 3 (coat-protein)	5p13.2
EXOC3	exocyst complex component 3	5p15.33
C5orf34	chromosome 5 open reading frame 34	5p12
RNU6-679P	RNA, U6 small nuclear 679, pseudogene	5p15.2
MTHFD2P6	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 6	5p13.1
EEF1A1P13	eukaryotic translation elongation factor 1 alpha 1 pseudogene 13	5p15.2
LRRC14B	leucine rich repeat containing 14B	5p15.33
RNU6-660P	RNA, U6 small nuclear 660, pseudogene	5p15.1
RNU6-358P	RNA, U6 small nuclear 358, pseudogene	5p13.3
ZNF622	zinc finger protein 622	5p15.1
KRT18P31	keratin 18 pseudogene 31	5p13.2
FBXO4	F-box protein 4	5p12
ADAMTS12	ADAM metallopeptidase with thrombospondin type 1 motif, 12	5q35
RNA5SP177	RNA, 5S ribosomal pseudogene 177	5p15.31
RNU1-150P	RNA, U1 small nuclear 150, pseudogene	5p13.1
CCDC11P1	coiled-coil domain containing 11 pseudogene 1	5p13.1
RPL5P14	ribosomal protein L5 pseudogene 14	5p13.3
RNA5SP176	RNA, 5S ribosomal pseudogene 176	5p15.31
AGXT2	alanine--glyoxylate aminotransferase 2	5p13
RN7SKP207	RNA, 7SK small nuclear pseudogene 207	5p13.3
NADK2-AS1	NADK2 antisense RNA 1	5p13.2
OXCT1-AS1	OXCT1 antisense RNA 1	5p13.1
IL7R	interleukin 7 receptor	5p13
UBE2QL1	ubiquitin-conjugating enzyme E2Q family-like 1	5p15.31
KRT18P56	keratin 18 pseudogene 56	5p13.1
RPL36AP21	ribosomal protein L36a pseudogene 21	5p15.1
ROPN1L	rhophilin associated tail protein 1-like	5p15
SNORD123	small nucleolar RNA, C/D box 123	5p15.2
ALG3P1	ALG3, alpha-1,3- mannosyltransferase pseudogene 1	5p15.32
CTNND2	catenin (cadherin-associated protein), delta 2	5p15.2
C5orf28	chromosome 5 open reading frame 28	5p12
OFD1P17	OFD1 pseudogene 17	5p13
FAM173B	family with sequence similarity 173, member B	5p15.2
NADK2	NAD kinase 2, mitochondrial	5p13.2
RNA5SP179	RNA, 5S ribosomal pseudogene 179	5p15.1
MRPL36	mitochondrial ribosomal protein L36	5p15.3
C5orf55	chromosome 5 open reading frame 55	5p15.33
MIR579	microRNA 579	5p13.3
OXCT1	3-oxoacid CoA transferase 1	5p13
RNU6-363P	RNA, U6 small nuclear 363, pseudogene	5p13.3
RNU6-374P	RNA, U6 small nuclear 374, pseudogene	5p14.1
WDR70	WD repeat domain 70	5p13.2
BASP1	brain abundant, membrane attached signal protein 1	5p15.1
MIR580	microRNA 580	5p13.2
SLC12A7	solute carrier family 12 (potassium/chloride transporter), member 7	5p15
SPEF2	sperm flagellar 2	5p13.2
RICTOR	RPTOR independent companion of MTOR, complex 2	5p13.1
C5orf17	chromosome 5 open reading frame 17	5p14.2
CCT6P2	chaperonin containing TCP1, subunit 6 (zeta) pseudogene 2	5p15.2
UGT3A2	UDP glycosyltransferase 3 family, polypeptide A2	5p13.2
RPL19P11	ribosomal protein L19 pseudogene 11	5p13.3
SLC6A19	solute carrier family 6 (neutral amino acid transporter), member 19	5p15
SNORD72	small nucleolar RNA, C/D box 72	5p13.1
RNA5SP180	RNA, 5S ribosomal pseudogene 180	5p15.1
PDCD6	programmed cell death 6	5p15.33
RN7SKP133	RNA, 7SK small nuclear pseudogene 133	5p15.1
FBXL7	F-box and leucine-rich repeat protein 7	5p15.1
PRKAA1	protein kinase, AMP-activated, alpha 1 catalytic subunit	5p13.1
DROSHA	drosha, ribonuclease type III	5q11.2
RNU6-378P	RNA, U6 small nuclear 378, pseudogene	5p13.3
HSPD1P1	heat shock 60kDa protein 1 (chaperonin) pseudogene 1	5p14.3
MARCH6	membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase	5p15.2
PLCXD3	phosphatidylinositol-specific phospholipase C, X domain containing 3	5p13.1
C6	complement component 6	5p13.1
LINC00604	long intergenic non-protein coding RNA 604	5p13.1
NKD2	naked cuticle homolog 2 (Drosophila)	5p15.3
RNA5SP181	RNA, 5S ribosomal pseudogene 181	5p13.2
SLC6A18	solute carrier family 6 (neutral amino acid transporter), member 18	5p15
TERT	telomerase reverse transcriptase	5p15.33
MYO10	myosin X	5p15.1-p14.3
LIFR-AS1	LIFR antisense RNA 1	5p13.1
EGFLAM-AS2	EGFLAM antisense RNA 2	5p13.2
SLC9A3	solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3	5p15.3
C5orf38	chromosome 5 open reading frame 38	5p15.33
ANKH	ANKH inorganic pyrophosphate transport regulator	5p15.2
C5orf51	chromosome 5 open reading frame 51	5p13.1
PRLR	prolactin receptor	5p14-p13
PAIP1	poly(A) binding protein interacting protein 1	5p12
RN7SL37P	RNA, 7SL, cytoplasmic 37, pseudogene	5p13.2
ANKRD33B-AS1	ANKRD33B antisense RNA 1	5p15.2
DNAJC21	DnaJ (Hsp40) homolog, subfamily C, member 21	5p13-p12
LINC01019	long intergenic non-protein coding RNA 1019	5p15.33
RNU6-484P	RNA, U6 small nuclear 484, pseudogene	5p13.2
RNU6-760P	RNA, U6 small nuclear 760, pseudogene	5p13.3
RBBP4P1	retinoblastoma binding protein 4 pseudogene 1	5p15.2
UBE2V1P12	ubiquitin-conjugating enzyme E2 variant 1 pseudogene 12	5p14.3
ZNF131	zinc finger protein 131	5p12
IRX4	iroquois homeobox 4	5p15.33
EGFLAM-AS1	EGFLAM antisense RNA 1	5p13.1
MED10	mediator complex subunit 10	5p15.31
AMACR	alpha-methylacyl-CoA racemase	5p13.2
SNHG18	small nucleolar RNA host gene 18 (non-protein coding)	5p15.31
HMGCS1	3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	5p14-p13
RNU7-161P	RNA, U7 small nuclear 161 pseudogene	5p13.1
NUP155	nucleoporin 155kDa	5p13.1
CMBL	carboxymethylenebutenolidase homolog (Pseudomonas)	5p15.2
MIR3650	microRNA 3650	5
RNU6-1003P	RNA, U6 small nuclear 1003, pseudogene	5p15.1
PLEKHG4B	pleckstrin homology domain containing, family G (with RhoGef domain) member 4B	5p15.33
FTH1P10	ferritin, heavy polypeptide 1 pseudogene 10	5p15.1
SEPHS2P1	selenophosphate synthetase 2 pseudogene 1	5p15.2
TPPP	tubulin polymerization promoting protein	5p15.33
RNU6-923P	RNA, U6 small nuclear 923, pseudogene	5p13.2
CCL28	chemokine (C-C motif) ligand 28	5p12
IRX2	iroquois homeobox 2	5p15.33
SPCS2P3	signal peptidase complex subunit 2 homolog (S. cerevisiae) pseudogene 3	5p15.33
MARK2P5	MAP/microtubule affinity-regulating kinase 2 pseudogene 5	5p15.1
NNT	nicotinamide nucleotide transhydrogenase	5p12
RNU6-381P	RNA, U6 small nuclear 381, pseudogene	5p12
GUSBP1	glucuronidase, beta pseudogene 1	5p14.3
MSNP1	moesin pseudogene 1	5p14.1
ZDHHC11	zinc finger, DHHC-type containing 11	5p15.2
EGFLAM	EGF-like, fibronectin type III and laminin G domains	5p13.2-p13.1
EGFLAM-AS3	EGFLAM antisense RNA 3	5p13.2
SDHA	succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	5p15
RAD1	RAD1 homolog (S. pombe)	5p13
ANXA2R	annexin A2 receptor	5p12
RAI14	retinoic acid induced 14	5p13.3-p13.2
HSPD1P15	heat shock 60kDa protein 1 (chaperonin) pseudogene 15	5p14.3
SEMA5A	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	5p15.2
RNU6-1079P	RNA, U6 small nuclear 1079, pseudogene	5p13.3
PAPD7	PAP associated domain containing 7	5p15
RNU6-909P	RNA, U6 small nuclear 909, pseudogene	5p14.1
RNU6-1190P	RNA, U6 small nuclear 1190, pseudogene	5p13.2
FASTKD3	FAST kinase domains 3	5p15.31
SRD5A1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	5p15.31
RN7SL58P	RNA, 7SL, cytoplasmic 58, pseudogene	5p14.3
DAB2	Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)	5p13.1
AHRR	aryl-hydrocarbon receptor repressor	5p15.33
RNU6-1305P	RNA, U6 small nuclear 1305, pseudogene	5p13.2
KIAA0947	KIAA0947	5p15
LINC00603	long intergenic non-protein coding RNA 603	5p13.1
ZDHHC11B	zinc finger, DHHC-type containing 11B	5p15.33
FAM105A	family with sequence similarity 105, member A	5p15.2
RANBP3L	RAN binding protein 3-like	5p13.2
RNU4-43P	RNA, U4 small nuclear 43, pseudogene	5p14.1
HMGB3P3	high mobility group box 3 pseudogene 3	5p15.32
MIR4458HG	MIR4458 host gene (non-protein coding)	5p15.31
MTMR12	myotubularin related protein 12	5p15.33
MIR4277	microRNA 4277	5
BRD9	bromodomain containing 9	5p15.33
MIR4636	microRNA 4636	5
TTC33	tetratricopeptide repeat domain 33	5p13.1
RNU7-130P	RNA, U7 small nuclear 130 pseudogene	5p13.2
MIR4279	microRNA 4279	5
UBL5P1	ubiquitin-like 5 pseudogene 1	5p13.3
CDH18	cadherin 18, type 2	5p14.3
RNA5SP178	RNA, 5S ribosomal pseudogene 178	5p15.1
RN7SL383P	RNA, 7SL, cytoplasmic 383, pseudogene	5p12
CLPTM1L	CLPTM1-like	5p15.33
C5orf22	chromosome 5 open reading frame 22	5p13.3
CT49
CCT5	chaperonin containing TCP1, subunit 5 (epsilon)	5p15.2
NSUN2	NOP2/Sun RNA methyltransferase family, member 2	5p15.32
MIR4456	microRNA 4456	5
SERBP1P6	SERPINE1 mRNA binding protein 1 pseudogene 6	5p13.1

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Region: chr5:0..48400000 View in gBrowse