ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	PAIP1
Approved Name	poly(A) binding protein interacting protein 1
Location	5p12
Position	chr5:43526369-43557860, -1
External Links	HGNC: 16945 Entrez Gene: 10605 Ensembl: ENSG00000172239 UCSC: uc003job.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
5p	chr5:0-48400000	1 (1/0/0)

Gene related GO terms (count: 14)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 14)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	biological process	TAS	9
GO:0016071	mRNA metabolic process	biological process	TAS	41
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	biological process	TAS	5
GO:0003723	RNA binding	molecular function	IEA	115
GO:0005737	cytoplasm	cellular component	TAS[9548260]	781
GO:0006413	translational initiation	biological process	TAS[9548260]	19
GO:0010467	gene expression	biological process	TAS	154
GO:0008494	translation activator activity	molecular function	IDA[9548260]	1
GO:0045727	positive regulation of translation	biological process	IDA[9548260]	6
GO:0005515	protein binding	molecular function	IPI[11997512]	1015
GO:0016070	RNA metabolic process	biological process	TAS	54
GO:0003677	DNA binding	molecular function	IEA	257
GO:0048255	mRNA stabilization	biological process	TAS[11997512]	5
GO:0005829	cytosol	cellular component	TAS	485

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with PAIP1 (count: 45)

Gene Symbol	Pathway Count	Pathway List
PARN	8	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
CNOT6	8	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; RNA binding; gene expression; protein binding; RNA metabolic process; cytosol;
RPL14	8	mRNA metabolic process; RNA binding; cytoplasm; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
RQCD1	7	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; gene expression; protein binding; RNA metabolic process; cytosol;
DCPS	7	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
LSM4	7	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; RNA binding; gene expression; protein binding; RNA metabolic process; cytosol;
TNKS1BP1	7	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; nuclear-transcribed mRNA poly(A) tail shortening; cytoplasm; gene expression; RNA metabolic process; cytosol;
DDX6	7	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; RNA binding; gene expression; protein binding; RNA metabolic process; cytosol;
PATL1	7	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; mRNA metabolic process; RNA binding; gene expression; protein binding; RNA metabolic process; cytosol;
XPO1	7	mRNA metabolic process; RNA binding; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
RNPS1	7	mRNA metabolic process; RNA binding; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
RPS25	7	mRNA metabolic process; RNA binding; cytoplasm; translational initiation; gene expression; RNA metabolic process; cytosol;
RPL13	7	mRNA metabolic process; RNA binding; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
RPS9	7	mRNA metabolic process; cytoplasm; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
RPL27A	7	mRNA metabolic process; RNA binding; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
RPS2	7	mRNA metabolic process; RNA binding; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
NCBP1	7	mRNA metabolic process; RNA binding; gene expression; protein binding; RNA metabolic process; DNA binding; cytosol;
RPS15A	7	mRNA metabolic process; RNA binding; cytoplasm; translational initiation; gene expression; RNA metabolic process; cytosol;
RPS3	7	mRNA metabolic process; cytoplasm; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
RPL38	6	mRNA metabolic process; RNA binding; translational initiation; gene expression; RNA metabolic process; cytosol;
SMG1	6	mRNA metabolic process; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
PSMC3	6	mRNA metabolic process; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
FAU	6	mRNA metabolic process; RNA binding; translational initiation; gene expression; RNA metabolic process; cytosol;
RPL12	6	mRNA metabolic process; RNA binding; translational initiation; gene expression; RNA metabolic process; cytosol;
RPL35	6	mRNA metabolic process; cytoplasm; translational initiation; gene expression; RNA metabolic process; cytosol;
RPS10	6	mRNA metabolic process; translational initiation; gene expression; protein binding; RNA metabolic process; cytosol;
RPL37	6	mRNA metabolic process; RNA binding; translational initiation; gene expression; RNA metabolic process; cytosol;
SMG7	6	mRNA metabolic process; cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
RPL3L	6	mRNA metabolic process; RNA binding; translational initiation; gene expression; RNA metabolic process; cytosol;
UBC	5	mRNA metabolic process; gene expression; protein binding; RNA metabolic process; cytosol;
HSPA8	5	mRNA metabolic process; gene expression; protein binding; RNA metabolic process; cytosol;
RPL37A	5	mRNA metabolic process; translational initiation; gene expression; RNA metabolic process; cytosol;
PSMB7	5	mRNA metabolic process; gene expression; protein binding; RNA metabolic process; cytosol;
RPS12	5	mRNA metabolic process; translational initiation; gene expression; RNA metabolic process; cytosol;
PSME1	5	mRNA metabolic process; cytoplasm; gene expression; RNA metabolic process; cytosol;
UBB	5	mRNA metabolic process; gene expression; protein binding; RNA metabolic process; cytosol;
PSMD5	5	mRNA metabolic process; gene expression; protein binding; RNA metabolic process; cytosol;
PSMD7	5	mRNA metabolic process; gene expression; protein binding; RNA metabolic process; cytosol;
FUS	5	RNA binding; cytoplasm; gene expression; protein binding; DNA binding;
SNRPG	5	RNA binding; gene expression; protein binding; RNA metabolic process; cytosol;
SNRPD1	5	RNA binding; gene expression; protein binding; RNA metabolic process; cytosol;
PDCD4	5	RNA binding; cytoplasm; protein binding; RNA metabolic process; cytosol;
GEMIN2	5	cytoplasm; gene expression; protein binding; RNA metabolic process; cytosol;
EIF2B1	5	cytoplasm; translational initiation; gene expression; protein binding; cytosol;
MAPK1	5	cytoplasm; positive regulation of translation; protein binding; DNA binding; cytosol;

Genes shared at least 2 KEGG pathways with PAIP1 (count: 0)

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Region: chr5:43526369..43557860 View in gBrowse