ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	CDH9
Approved Name	cadherin 9, type 2 (T1-cadherin)
Location	5p14
Position	chr5:26880709-27121257, -1
External Links	HGNC: 1768 Entrez Gene: 1007 Ensembl: ENSG00000113100 UCSC: uc003jgs.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
5p	chr5:0-48400000	1 (1/0/0)

Gene related GO terms (count: 9)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 9)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005886	plasma membrane	cellular component	TAS	839
GO:0016337	cell-cell adhesion	biological process	NAS[10861224]	15
GO:0034332	adherens junction organization	biological process	TAS	13
GO:0005509	calcium ion binding	molecular function	IEA	140
GO:0003674	molecular_function	molecular function	ND	149
GO:0007156	homophilic cell adhesion	biological process	NAS	31
GO:0016021	integral to membrane	cellular component	NAS	932
GO:0045216	cell-cell junction organization	biological process	TAS	15
GO:0034329	cell junction assembly	biological process	TAS	18

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with CDH9 (count: 14)

Gene Symbol	Pathway Count	Pathway List
CDH10	8	plasma membrane; cell-cell adhesion; adherens junction organization; calcium ion binding; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CDH12	8	plasma membrane; cell-cell adhesion; adherens junction organization; calcium ion binding; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CDH6	7	plasma membrane; adherens junction organization; calcium ion binding; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CDH15	7	plasma membrane; adherens junction organization; calcium ion binding; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CDH2	7	plasma membrane; adherens junction organization; calcium ion binding; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CDH18	7	plasma membrane; adherens junction organization; calcium ion binding; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
PVRL1	7	plasma membrane; cell-cell adhesion; adherens junction organization; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CADM1	6	plasma membrane; adherens junction organization; homophilic cell adhesion; integral to membrane; cell-cell junction organization; cell junction assembly;
CDH4	6	plasma membrane; adherens junction organization; calcium ion binding; homophilic cell adhesion; cell-cell junction organization; cell junction assembly;
CDH13	6	plasma membrane; adherens junction organization; calcium ion binding; homophilic cell adhesion; cell-cell junction organization; cell junction assembly;
CTNND1	5	plasma membrane; cell-cell adhesion; adherens junction organization; cell-cell junction organization; cell junction assembly;
CADM2	5	plasma membrane; adherens junction organization; integral to membrane; cell-cell junction organization; cell junction assembly;
DSG1	5	plasma membrane; cell-cell adhesion; calcium ion binding; homophilic cell adhesion; integral to membrane;
CDH19	5	plasma membrane; cell-cell adhesion; calcium ion binding; homophilic cell adhesion; integral to membrane;

Genes shared at least 2 KEGG pathways with CDH9 (count: 0)

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Region: chr5:26880709..27121257 View in gBrowse