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ADHDgene Database
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Keyword:
Type:
SNP
Gene
Region
Pathway
Study(PMID)
Large-scale studies
Genome-wide Association Studies of ADHD
Genome-wide Linkage Studies of ADHD
Genome-wide CNV Analyses of ADHD
Meta-analysis Studies of ADHD
Data Summary
Published Variant
SNP:
1391
CNV:
398
Others:
173
Published Gene:
359
Published Region:
128
Pathway by PBA:
8
Study:
361
Detail ...
SNP Report
Basic Info
Name
rs9832712
dbSNP
Ensembl
Location
chr3:165483087(Fwd)
Variant Alleles
A/T
Ancestral Allele
A
No. of Studies
1 (significant: 0; non-significant: 1; trend: 0)
Source
Literature-origin
SNP related studies (count: 1)
Reference
Allele Change
Risk Allele
Statistical Values
Author Comments
Result of Statistical Analysis
Jacob CP, 2013
T/A
Uncorrected P-value=0.051
Uncorrected P-value=0.051
SNP indicated no significant association with ADHD
SNP indicated no significant association with ADHD
Non-significant
SNP related genes (count: 1)
Literature-origin genes (count: 1)
Approved Symbol
Approved Name
Location
No. of Studies (significant/non-significant/trend)
BCHE
butyrylcholinesterase
3q26.1-q26.2
1(1/0/0)
Genes from other sources
(count: 0)
SNPs in LD with rs9832712 (count: 67)
View in gBrowse (chr3:127779825..165666554 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold
r
2
>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 67)
rs_ID
Functional Annotation
r
2
[population]
rs3806650
upstream_gene_variant
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs4680666
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs864908
0.924[JPT]
rs1706429
1.0[CHB]; 1.0[JPT]
rs7653294
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs2686399
downstream_gene_variant
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs3863085
downstream_gene_variant
0.933[JPT]
rs1613764
0.933[CHB]; 1.0[JPT]
rs2686405
downstream_gene_variant; intron_variant; NMD_transcript_variant
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.928[YRI]
rs829785
1.0[CHB]; 1.0[JPT]; 0.881[YRI]
rs2009865
0.934[JPT]
rs1626881
0.952[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs11711013
0.937[CHB]; 1.0[JPT]
rs1707716
1.0[CHB]; 1.0[JPT]
rs12053876
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs17659116
0.934[JPT]
rs3908218
0.933[JPT]
rs17659724
0.93[JPT]
rs829783
1.0[CHB]; 1.0[JPT]
rs1706441
1.0[CHB]; 1.0[JPT]
rs705017
0.891[CHB]; 1.0[JPT]
rs1511979
0.933[JPT]
rs11720167
downstream_gene_variant
0.933[JPT]
rs12107166
intron_variant; NMD_transcript_variant
0.931[JPT]
rs17519507
0.933[JPT]
rs7645596
1.0[CEU]; 0.943[CHB]; 1.0[JPT]
rs1706419
1.0[CHB]; 1.0[JPT]
rs1868530
0.933[JPT]
rs966224
0.943[CHB]; 1.0[JPT]
rs6445035
0.934[JPT]
rs4680665
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs2668208
downstream_gene_variant; intron_variant; NMD_transcript_variant
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.928[YRI]
rs7610733
0.921[CHB]; 1.0[JPT]
rs17715654
0.934[JPT]
rs2118657
1.0[CEU]; 0.943[CHB]; 1.0[JPT]
rs1707714
1.0[CHB]; 1.0[JPT]
rs4680608
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs1706411
1.0[CHB]; 1.0[JPT]; 0.926[YRI]
rs2686409
downstream_gene_variant; intron_variant; NMD_transcript_variant
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.928[YRI]
rs1803274
3_prime_UTR_variant; downstream_gene_variant; missense_variant; NMD_transcript_variant
0.934[JPT]
rs1398616
1.0[CHB]; 1.0[JPT]
rs7627395
0.934[JPT]
rs1706418
1.0[CHB]; 1.0[JPT]
rs1007845
1.0[CHB]; 1.0[JPT]
rs4465985
intron_variant; NMD_transcript_variant
0.934[JPT]
rs1398617
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs1706421
1.0[CHB]; 1.0[JPT]
rs9864022
1.0[CEU]; 0.945[CHB]; 1.0[JPT]
rs6773027
0.862[CEU]; 0.945[CHB]; 1.0[JPT]
rs2668203
downstream_gene_variant; intron_variant; NMD_transcript_variant
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.928[YRI]
rs17658319
0.934[JPT]
rs1403015
1.0[CHB]; 1.0[JPT]; 0.92[YRI]
rs2668209
downstream_gene_variant; intron_variant; NMD_transcript_variant
0.955[CEU]
rs1707690
0.823[CEU]; 1.0[CHB]; 1.0[JPT]; 0.958[YRI]
rs4680607
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs705016
1.0[CHB]; 1.0[JPT]
rs4680606
intron_variant; NMD_transcript_variant
1.0[CHB]; 1.0[JPT]
rs4680664
intron_variant; NMD_transcript_variant
0.942[CHB]; 1.0[JPT]
rs1707638
1.0[CHB]; 1.0[JPT]
rs1707705
1.0[CHB]; 1.0[JPT]
rs6788406
0.943[CHB]; 1.0[JPT]
rs1707691
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
rs4602440
0.943[CHB]; 1.0[JPT]
rs17459269
0.933[JPT]
rs6771420
0.805[JPT]
rs17658995
0.934[JPT]
rs3894957
1.0[CHB]; 1.0[JPT]; 0.92[YRI]