SNP Report

Basic Info

SNP related studies (count: 1)

SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 11)

rs_ID |
Functional Annotation |
r2[population] |
rs10008797
|
intron_variant; NMD_transcript_variant |
0.823[JPT]
|
rs7666534
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
1.0[JPT]
|
rs4992204
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.859[CHB]; 0.902[JPT]
|
rs7659299
|
intron_variant; NMD_transcript_variant |
0.823[JPT]
|
rs1427626
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
1.0[CHB]; 0.915[JPT]
|
rs6829378
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.885[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs13137632
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.941[CHB]; 0.822[JPT]
|
rs9968512
|
intron_variant; NMD_transcript_variant |
0.824[JPT]
|
rs10517917
|
intron_variant; NMD_transcript_variant |
0.823[JPT]
|
rs7688165
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
1.0[JPT]
|
rs12505847
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.943[CHB]; 0.915[JPT]
|