ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs7683787 dbSNP Ensembl
Location chr4:91830629(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation intron_variant; nc_transcript_variant; NMD_transcript_variant.
Consequence to Transcript intron_variant(ENST00000333691; ENST00000503421; ENST00000505073; ENST00000509109; ENST00000509176; ENST00000513522; ENST00000515693)
nc_transcript_variant(ENST00000515693)
NMD_transcript_variant(ENST00000505073; ENST00000509109; ENST00000513522)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Lantieri F, 2010 TDT P-value=E-05 TDT P-value=E-05 a level of significance only reached by a total of five SNPs...... a level of significance only reached by a total of five SNPs in this genome-wide data More... Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs7683787 (count: 15) View in gBrowse (chr4:91826328..91852795 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 15)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014