ADHDgene Database

SNP Report

Basic Info

Name	rs687623 dbSNP Ensembl
Location	Chr15:55731181(Fwd)
Variant Alleles	C/G/T/A
Ancestral Allele	C
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000524160) downstream_gene_variant(ENST00000562625) intron_variant(ENST00000457155; ENST00000568310; ENST00000321149; ENST00000524160; ENST00000565113; ENST00000348518; ENST00000448430; ENST00000380679) nc_transcript_variant(ENST00000568310; ENST00000565113)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
DYX1C1	dyslexia susceptibility 1 candidate 1	15q21.1	1(0/1/0)

Approved Symbol	Approved Name	Location
DYX1C1-CCPG1	DYX1C1-CCPG1 readthrough (non-protein coding)	15q

SNPs in LD with rs687623 (count: 1) View in gBrowse (chr15:55731181..55760575 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs692691	NMD_transcript_variant; intron_variant; nc_transcript_variant	1(0/1/0)	1.0[ASW]; 0.901[CEU]; 1.0[CHB]; 0.864[CHD]; 0.924[GIH]; 1.0[JPT]; 1.0[MEX]; 0.81[MKK]; 0.886[TSI]; 1.0[YRI]