SNP Report

Basic Info
Name |
rs489710
dbSNP
Ensembl
|
Location |
chr18:66314284(Fwd) |
Variant Alleles |
T/C |
Ancestral Allele |
C |
No. of Studies |
1 (significant: 0; non-significant: 1; trend: 0) |
Source |
Literature-origin
|

SNP related studies (count: 1)

SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 12)

rs_ID |
Functional Annotation |
r2[population] |
rs583563
|
|
0.92[CHB]; 0.92[JPT]
|
rs613891
|
|
1.0[CHB]; 1.0[CHD]; 1.0[JPT]
|
rs1397170
|
|
0.918[CEU]; 0.92[CHB]; 1.0[CHD]; 0.92[JPT]; 1.0[GIH]; 0.845[MEX]
|
rs576987
|
|
0.913[CEU]; 0.92[CHB]; 0.907[CHD]; 1.0[JPT]; 0.911[GIH]; 0.845[MEX]
|
rs1788676
|
|
1.0[CHB]; 1.0[JPT]
|
rs1510235
|
|
1.0[CHB]; 1.0[CHD]; 1.0[JPT]
|
rs1510237
|
|
0.906[CEU]; 0.92[CHB]; 1.0[JPT]
|
rs679128
|
|
0.915[CHB]; 0.919[JPT]
|
rs12232586
|
|
1.0[CHB]; 0.92[JPT]
|
rs1397172
|
|
1.0[CHB]; 1.0[JPT]
|
rs627419
|
|
0.92[CHB]; 1.0[CHD]; 1.0[JPT]
|
rs1510238
|
|
0.918[CEU]; 1.0[CHB]; 1.0[JPT]; 0.917[YRI]
|