ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs3178 dbSNP Ensembl
Location chr6:24147572(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000378491)
downstream_gene_variant(ENST00000378477)
intron_variant(ENST00000468195)
nc_transcript_variant(ENST00000468195)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Couto JM, 2009 G:A Single-marker TDT analysis P-value=0.018 Single-marker TDT analysis P-value=0.018 This marker in gene VMP was significantly associated with AD...... This marker in gene VMP was significantly associated with ADHD. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs3178 (count: 5) View in gBrowse (chr6:24141920..24167807 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)