ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2939678 dbSNP Ensembl
Location chr8:56247138(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000327381)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Neale BM, 2008 A:G Uncorrected TDT P-value=3.87E-05 (OR=0.7222) Uncorrected TDT P-value=3.87E-05 (OR=0.7222) One of top 25 results in uncorrected TDT test One of top 25 results in uncorrected TDT test Non-significant
Lantieri F, 2010 A:G Binomial P-value=0.05, OR=0.82 for whole sample; Binomial P-...... Binomial P-value=0.05, OR=0.82 for whole sample; Binomial P-value=0.3, OR=0.91 for C-subtype More... significant in this sample, but not significant after correc...... significant in this sample, but not significant after correction for multiple tests More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2939678 (count: 1) View in gBrowse (chr8:56229879..56247138 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 1)