rs_ID |
Functional Annotation |
r2[population] |
rs1108842
|
5_prime_UTR_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.83[CHB]
|
rs11716747
|
intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs1029871
|
downstream_gene_variant; missense_variant |
0.83[CHB]; 0.825[JPT]
|
rs6445535
|
downstream_gene_variant; intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs3617
|
downstream_gene_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.911[CHB]; 0.838[CHD]; 0.953[JPT]; 0.912[GIH]; 0.878[LWK]; 0.889[YRI]
|
rs3733039
|
intron_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs11130310
|
intron_variant; NMD_transcript_variant |
0.83[CHB]
|
rs3774366
|
downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs35526119
|
intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs6804145
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2268023
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.862[CHB]; 0.865[JPT]
|
rs6762813
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs2268026
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs3774354
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.862[CHB]; 0.82[CHD]; 0.865[JPT]
|
rs11177
|
downstream_gene_variant; missense_variant; nc_transcript_variant; NMD_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.83[CHB]
|
rs2289250
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2230535
|
downstream_gene_variant; synonymous_variant |
0.83[CHB]; 0.825[JPT]
|
rs1014969
|
upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs2071044
|
downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.866[CHB]; 0.822[JPT]; 0.867[GIH]; 0.828[LWK]; 0.826[MKK]; 0.946[YRI]
|
rs7624716
|
intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs2028216
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2286798
|
downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.91[CHB]; 0.872[CHD]; 0.908[JPT]
|
rs1866268
|
intron_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs33967311
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs3733041
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs4687550
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant |
0.862[CHB]; 0.865[JPT]
|
rs2289247
|
downstream_gene_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant |
0.83[CHB]; 0.825[JPT]
|
rs9324
|
3_prime_UTR_variant; downstream_gene_variant; nc_transcript_variant; non_coding_exon_variant; synonymous_variant; upstream_gene_variant |
0.82[TSI]; 0.859[CHB]; 0.848[CHD]; 0.865[JPT]; 0.831[MEX]
|
rs11130315
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2079929
|
intron_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs2710323
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.954[CHB]; 0.88[CHD]
|
rs11130312
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2336149
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs4687638
|
intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs10865974
|
intron_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs3774355
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.862[CHB]; 0.825[JPT]
|
rs6778329
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.903[CHB]; 0.899[JPT]
|
rs1561337
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2336545
|
intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs3755799
|
upstream_gene_variant |
0.802[CHD]
|
rs2535627
|
downstream_gene_variant |
0.826[CHB]; 0.825[JPT]; 0.891[GIH]
|
rs1042779
|
downstream_gene_variant; missense_variant; NMD_transcript_variant; upstream_gene_variant |
0.81[CEU]; 1.0[CHB]; 0.923[CHD]; 0.865[JPT]
|
rs2083180
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2239551
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.859[CHB]; 0.847[CHD]; 0.865[JPT]
|
rs2072390
|
intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.82[JPT]
|
rs2240919
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.91[CHB]; 0.861[JPT]
|
rs13085895
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs1075653
|
downstream_gene_variant; intron_variant; nc_transcript_variant; splice_region_variant; upstream_gene_variant |
0.82[TSI]; 0.862[CHB]; 0.848[CHD]; 0.865[JPT]; 0.872[MEX]
|
rs2239549
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant |
0.819[CHB]; 0.848[CHD]; 0.865[JPT]
|
rs2071507
|
downstream_gene_variant; upstream_gene_variant |
0.91[CHB]; 0.908[JPT]
|
rs12496634
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs8906
|
5_prime_UTR_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs11130317
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs13068293
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2071506
|
downstream_gene_variant; upstream_gene_variant |
0.822[TSI]; 0.817[CHB]; 0.848[CHD]; 0.865[JPT]; 0.872[MEX]
|
rs2071508
|
downstream_gene_variant; upstream_gene_variant |
0.822[TSI]; 0.856[CHB]; 0.848[CHD]; 0.865[JPT]; 0.913[MEX]
|
rs3755806
|
nc_transcript_variant; NMD_transcript_variant; non_coding_exon_variant; synonymous_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs13083798
|
intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.826[CHB]
|
rs2164885
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.822[CHB]; 0.862[JPT]
|
rs6617
|
5_prime_UTR_variant; downstream_gene_variant; intron_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs9881468
|
downstream_gene_variant; upstream_gene_variant |
0.82[TSI]; 0.862[CHB]; 0.823[CHD]; 0.865[JPT]; 0.833[MEX]
|
rs12488461
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.811[JPT]
|
rs2268025
|
intron_variant |
0.866[CHB]; 0.825[JPT]
|
rs2240920
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.803[CEU]; 0.866[TSI]; 0.91[CHB]; 0.872[CHD]; 0.908[JPT]; 0.913[MEX]
|
rs13064064
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs4687548
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs767418
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.83[CHB]; 0.817[JPT]
|
rs11130323
|
downstream_gene_variant; intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs13082208
|
intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.856[CHB]; 0.946[JPT]
|
rs2268027
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
0.813[CHB]; 0.813[JPT]
|
rs3774365
|
downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs12497998
|
downstream_gene_variant; intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs736408
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.904[CEU]; 0.954[CHB]; 0.953[JPT]; 0.944[YRI]
|
rs11717836
|
upstream_gene_variant |
0.813[CHB]; 0.81[JPT]
|
rs1076425
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.822[TSI]; 0.862[CHB]; 0.848[CHD]; 0.865[JPT]; 0.831[MEX]
|
rs13082960
|
intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.82[JPT]
|
rs6445534
|
downstream_gene_variant; upstream_gene_variant |
0.83[CHB]
|
rs7611731
|
downstream_gene_variant; intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs10510760
|
intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs3755798
|
downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.825[JPT]
|
rs12635140
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs3733045
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; non_coding_exon_variant |
0.83[CHB]; 0.825[JPT]
|
rs2239699
|
downstream_gene_variant; upstream_gene_variant |
0.803[CEU]; 0.893[CHB]; 0.841[JPT]
|
rs2276824
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.83[CHB]
|
rs13071584
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs7622694
|
intron_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs6976
|
3_prime_UTR_variant; downstream_gene_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs2270197
|
downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.862[CHB]; 0.865[JPT]
|
rs9879090
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant |
0.822[CHB]
|
rs13079063
|
downstream_gene_variant; upstream_gene_variant |
0.821[CHB]; 0.861[JPT]
|
rs2159644
|
downstream_gene_variant; intron_variant |
0.83[CHB]; 0.825[JPT]
|
rs2019065
|
upstream_gene_variant |
1.0[CHB]; 0.948[CHD]; 0.908[JPT]
|
rs998909
|
upstream_gene_variant |
0.823[CHB]; 0.857[JPT]
|
rs10865973
|
intron_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs2300149
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant |
0.862[CHB]; 0.848[CHD]; 0.865[JPT]
|
rs10780035
|
intron_variant; upstream_gene_variant |
0.83[CHB]; 0.825[JPT]
|
rs34017441
|
downstream_gene_variant; upstream_gene_variant |
0.83[CHB]; 0.865[JPT]
|
rs4481150
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.807[CHB]; 0.855[JPT]; 0.908[GIH]
|
rs4687551
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant |
0.844[TSI]; 0.862[CHB]; 0.848[CHD]; 0.825[JPT]; 0.872[MEX]
|
rs12487591
|
downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.83[CHB]; 0.825[JPT]
|
rs678
|
downstream_gene_variant; missense_variant; NMD_transcript_variant; upstream_gene_variant |
0.91[CHB]; 0.908[JPT]
|