ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2535629 dbSNP Ensembl
Location chr3:52833219(Fwd)
Variant Alleles G/A
Ancestral Allele A
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000467268)
intron_variant(ENST00000416872; ENST00000449956; ENST00000463893; ENST00000465243)
nc_transcript_variant(ENST00000463893; ENST00000465243)
upstream_gene_variant(ENST00000464804; ENST00000465314; ENST00000475931; ENST00000495622)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
PGC, 2013 G/A Five disorder meta-analysis, P-value=2.54E-12, OR (95% CI)=1...... Five disorder meta-analysis, P-value=2.54E-12, OR (95% CI)=1.10 (1.07-1.12), Heterogeneity P-value=0.27; for ADHD only, P-value=0.201 More... Significant association was observed in cross-disorder analy...... Significant association was observed in cross-disorder analysis. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs2535629 (count: 101) View in gBrowse (chr3:52637486..52847601 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 101)