ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2439832 dbSNP Ensembl
Location chr15:43779686(Fwd)
Variant Alleles C/T
Ancestral Allele T
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000263801; ENST00000382039; ENST00000382044; ENST00000413546; ENST00000450115; ENST00000572085)
nc_transcript_variant(ENST00000572085)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Neale BM, 2008 T:C Uncorrected TDT P-value=4.66E-05 (OR=0.6567) Uncorrected TDT P-value=4.66E-05 (OR=0.6567) One of top 25 results in uncorrected TDT test One of top 25 results in uncorrected TDT test Non-significant
Lantieri F, 2010 T:C Binomial P-value=0.68, OR=1.06 for whole sample; Binomial P-...... Binomial P-value=0.68, OR=1.06 for whole sample; Binomial P-value=0.46, OR=0.96 for C-subtype More... no significant association no significant association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs2439832 (count: 119) View in gBrowse (chr15:43594900..43991328 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 119)