ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2291560 dbSNP Ensembl
Location chr7:128477472(Fwd)
Variant Alleles T/C
Ancestral Allele C
Functional Annotation synonymous_variant; upstream_gene_variant.
Consequence to Transcript synonymous_variant(ENST00000325888; ENST00000346177)
upstream_gene_variant(ENST00000388853)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Neale BM, 2010 (b) T:C GLM P-value=3.21E-05, meta-analysis P-value=0.002541 GLM P-value=3.21E-05, meta-analysis P-value=0.002541 One of the top 100 SNPs from imputed IMAGE II dataset One of the top 100 SNPs from imputed IMAGE II dataset Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2291560 (count: 2) View in gBrowse (chr7:128470838..128477547 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)