ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2275723 dbSNP Ensembl
Location chr10:135139635(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000368558)
downstream_gene_variant(ENST00000368555; ENST00000368556)
intron_variant(ENST00000252939; ENST00000368554)
nc_transcript_variant(ENST00000467433; ENST00000467611)
non_coding_exon_variant(ENST00000467433; ENST00000467611)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Laurin N, 2005 C/T allelic ETDT P-value=0.039, X2(1df)=4.267 allelic ETDT P-value=0.039, X2(1df)=4.267 TDT statistic was significant TDT statistic was significant Significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)

SNPs in LD with rs2275723 (count: 26) View in gBrowse (chr10:135076523..135139635 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 26)