ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2240717 dbSNP Ensembl
Location chr22:19969106(Fwd)
Variant Alleles A/G
Ancestral Allele G
Functional Annotation downstream_gene_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Polyphen Annotation: benign(ENST00000263207; ENST00000344269; ENST00000401994; ENST00000406259; ENST00000406522)
SIFT Annotation: tolerated(ENST00000263207; ENST00000344269; ENST00000401994; ENST00000406259; ENST00000406522)
Consequence to Transcript downstream_gene_variant(ENST00000467828)
missense_variant(ENST00000263207; ENST00000344269; ENST00000401994; ENST00000406259; ENST00000406522)
nc_transcript_variant(ENST00000462319; ENST00000473551; ENST00000487793; ENST00000492625)
non_coding_exon_variant(ENST00000462319; ENST00000473551; ENST00000487793; ENST00000492625)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Michaelovsky E, 2008 T/C X2(1)=0.34 X2(1)=0.34 no significant association no significant association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs2240717 (count: 13) View in gBrowse (chr22:19967980..19984013 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 13)