ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2049046 dbSNP Ensembl
Location chr11:27723775(Fwd)
Variant Alleles T/A
Ancestral Allele T
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000499568; ENST00000500662; ENST00000502161)
intron_variant(ENST00000314915; ENST00000395978; ENST00000395981; ENST00000525950; ENST00000530663; ENST00000532997)
upstream_gene_variant(ENST00000356660; ENST00000395980; ENST00000395983; ENST00000395986; ENST00000418212; ENST00000420794; ENST00000438929; ENST00000530786; ENST00000530861; ENST00000533131; ENST00000533246; ENST00000584049)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Lee J, 2007 T/A T Allelic TDT P-value=0.534 for all transmissions, P-value=0.4...... Allelic TDT P-value=0.534 for all transmissions, P-value=0.413 for paternal transmissions, P-value=0.819 for maternal transmissions | quantitative analysis FBAT smallest P-value=0.395 for Digit span backward More... No significant evidence of biased transmission or relationsh...... No significant evidence of biased transmission or relationship between this allele and the two ADHD symptom dimensions or short-term and working memory scores More... Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)

SNPs in LD with rs2049046 (count: 12) View in gBrowse (chr11:27667531..27746991 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 12)