ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1799836 dbSNP Ensembl
Location chrX:43627999(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000378069; ENST00000536181; ENST00000538942)
No. of Studies 2 (significant: 1; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Li J, 2008 A/G TDT P-value=3.28E-15, X2=62.09 TDT P-value=3.28E-15, X2=62.09 significantly biased transmitted to ADHD offspring significantly biased transmitted to ADHD offspring Significant
Domschke K, 2005 T/C allelic TDT P-value=1.0, X2=0, df=1 allelic TDT P-value=1.0, X2=0, df=1 did not show any significant distortion in the transmission ...... did not show any significant distortion in the transmission to ADHD cases More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1799836 (count: 9) View in gBrowse (chrX:43627999..43772478 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 9)