ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs15534 dbSNP Ensembl
Location chr16:55736527(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000379906; ENST00000414754; ENST00000567238)
downstream_gene_variant(ENST00000566163; ENST00000568943)
intron_variant(ENST00000219833; ENST00000561820; ENST00000574918)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Kim JW, 2008 X2=0.443, P-value=0.505, OR=1.08 X2=0.443, P-value=0.505, OR=1.08 not associated with ADHD not associated with ADHD Non-significant
Sengupta, S. M., 2012 C/T P-value=0.45, Z statistic (allele 1)=0.76 P-value=0.45, Z statistic (allele 1)=0.76 No significant association was found in this study. No significant association was found in this study. Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs15534 (count: 22) View in gBrowse (chr16:55717483..55782138 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 22)