ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1412005 dbSNP Ensembl
Location chr9:93409161(Fwd)
Variant Alleles T/G
Ancestral Allele G
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000375765)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Reif, A., 2011 G/T P-value=0.0182, OR (allele)=1.29 (T), 95% CI=1.04-1.58 in Ge...... P-value=0.0182, OR (allele)=1.29 (T), 95% CI=1.04-1.58 in German discovery sample; P-value=0.3785, OR (allele)=1.06 (T), 95% CI=0.93-1.21 in IMpACT replication sample; P-value=0.0437, OR (allele)=1.12 (T), 95% CI=1.00-1.25 in pooled data; PDT P-value=0.6565 for allele T in the family-based analysis More... 4 out of 12 investigated SNPs had p<0.05 in the association ...... 4 out of 12 investigated SNPs had p<0.05 in the association test with aADHD. Replication in 1035 aADHD patients and 1381 controls from IMpACT did not show any significant SNP association. The rs1412005 T allele was not significantly over-transmitted, but the C allele of the neighboring SNP rs7848810-also a promoter SNP-was. More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1412005 (count: 15) View in gBrowse (chr9:93402190..93436857 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 15)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014