ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1397547 dbSNP Ensembl
Location chr4:62845388(Fwd)
Variant Alleles G/C
Ancestral Allele C
Functional Annotation synonymous_variant.
Consequence to Transcript synonymous_variant(ENST00000502815; ENST00000504896; ENST00000506700; ENST00000506720; ENST00000506746; ENST00000507164; ENST00000507625; ENST00000508693; ENST00000508946; ENST00000509896; ENST00000511324; ENST00000512091; ENST00000514157; ENST00000514591; ENST00000514996; ENST00000545650)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Domene S, 2011 c.2709G>C ObsHET/PredHET=0.177/0.168 ObsHET/PredHET=0.177/0.168 neither susceptibility nor protective haplotype alleles are ...... neither susceptibility nor protective haplotype alleles are associated with obviously significant coding region changes, or canonical splice site alterations More... Trend

SNP related genes (count: 0)

SNPs in LD with rs1397547 (count: 10) View in gBrowse (chr4:62765805..62845388 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 10)