ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs13113012 dbSNP Ensembl
Location chr4:167810891(Fwd)
Variant Alleles G/T
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant; NMD_transcript_variant.
Consequence to Transcript intron_variant(ENST00000357154; ENST00000357545; ENST00000421836; ENST00000502330; ENST00000502741; ENST00000502821; ENST00000504953; ENST00000505187; ENST00000506886; ENST00000507086; ENST00000507137; ENST00000507370; ENST00000509854; ENST00000510403; ENST00000510741; ENST00000511226; ENST00000511269; ENST00000511531; ENST00000511905; ENST00000512648; ENST00000512681; ENST00000515143; ENST00000534949; ENST00000535728; ENST00000541354; ENST00000541637)
nc_transcript_variant(ENST00000507137)
NMD_transcript_variant(ENST00000502741; ENST00000502821; ENST00000505187; ENST00000507086; ENST00000507370; ENST00000511226; ENST00000511905; ENST00000515143)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Weber, H.,2013 G/T Allele P-value = 0.642, corrected P-value = 1 Allele P-value = 0.642, corrected P-value = 1 No significant association was observed No significant association was observed Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs13113012 (count: 28) View in gBrowse (chr4:167743180..167825025 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 28)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014