ADHDgene Database

SNP Report

Basic Info

Name	rs11764590 dbSNP Ensembl
Location	chr7:2032803(Fwd)
Variant Alleles	C/T
Ancestral Allele	C
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000265854; ENST00000399654; ENST00000402746; ENST00000406869; ENST00000438959; ENST00000444373)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Schimmelmann, B. G.,2013			Nominal two-sided P-value=0.431 (OR=1.08;95%CI=0.90-1.28) Nominal two-sided P-value=0.431 (OR=1.08;95%CI=0.90-1.28)	We found no significant association of childhood ADHD with t...... We found no significant association of childhood ADHD with this locus. More...	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
MAD1L1	MAD1 mitotic arrest deficient-like 1 (yeast)	7p22	1(0/1/0)

SNPs in LD with rs11764590 (count: 22) View in gBrowse (chr7:1881527..2110346 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs11762636	intron_variant	0.933[CEU]
rs3823624	intron_variant; nc_transcript_variant	0.936[CEU]; 0.868[TSI]; 0.903[GIH]; 0.921[MEX]
rs4721098	downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	0.846[CHB]
rs1403175	intron_variant	1.0[CHB]
rs11766944	3_prime_UTR_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	0.846[CHB]
rs4332037	intron_variant	1.0[CHB]; 1.0[CHD]; 0.88[GIH]
rs11772627	intron_variant; nc_transcript_variant	0.933[CEU]
rs6951956	downstream_gene_variant; intron_variant	1.0[CHB]
rs1533827	intron_variant	0.936[CEU]; 0.902[TSI]; 0.877[GIH]; 0.921[MEX]
rs11773627	intron_variant	0.819[CEU]; 1.0[ASW]; 1.0[CHB]; 1.0[CHD]; 1.0[JPT]; 0.95[GIH]; 1.0[MEX]; 1.0[YRI]
rs10268609	intron_variant	1.0[CHB]; 0.923[CHD]; 0.834[GIH]
rs6947019	intron_variant	1.0[CHB]
rs6461009	intron_variant	1.0[CHB]
rs868754	intron_variant	0.935[CEU]
rs9639201	intron_variant	0.846[CHB]; 0.846[CHD]; 1.0[JPT]
rs1533829	intron_variant	0.817[TSI]
rs11770148	intron_variant; nc_transcript_variant	1.0[CHB]
rs3996329	downstream_gene_variant; intron_variant	1.0[CHB]; 1.0[JPT]
rs10276536	intron_variant	0.817[TSI]
rs10267593	downstream_gene_variant; intron_variant	1.0[CHB]; 0.927[CHD]
rs3996325	downstream_gene_variant; intron_variant	0.844[TSI]
rs11764337	downstream_gene_variant; intron_variant; nc_transcript_variant	0.846[CHB]; 0.927[CHD]