SNP Report

Basic Info

SNP related studies (count: 1)

SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 22)

rs_ID |
Functional Annotation |
r2[population] |
rs11762636
|
intron_variant |
0.933[CEU]
|
rs3823624
|
intron_variant; nc_transcript_variant |
0.936[CEU]; 0.868[TSI]; 0.903[GIH]; 0.921[MEX]
|
rs4721098
|
downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant |
0.846[CHB]
|
rs1403175
|
intron_variant |
1.0[CHB]
|
rs11766944
|
3_prime_UTR_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant |
0.846[CHB]
|
rs4332037
|
intron_variant |
1.0[CHB]; 1.0[CHD]; 0.88[GIH]
|
rs11772627
|
intron_variant; nc_transcript_variant |
0.933[CEU]
|
rs6951956
|
downstream_gene_variant; intron_variant |
1.0[CHB]
|
rs1533827
|
intron_variant |
0.936[CEU]; 0.902[TSI]; 0.877[GIH]; 0.921[MEX]
|
rs11773627
|
intron_variant |
0.819[CEU]; 1.0[ASW]; 1.0[CHB]; 1.0[CHD]; 1.0[JPT]; 0.95[GIH]; 1.0[MEX]; 1.0[YRI]
|
rs10268609
|
intron_variant |
1.0[CHB]; 0.923[CHD]; 0.834[GIH]
|
rs6947019
|
intron_variant |
1.0[CHB]
|
rs6461009
|
intron_variant |
1.0[CHB]
|
rs868754
|
intron_variant |
0.935[CEU]
|
rs9639201
|
intron_variant |
0.846[CHB]; 0.846[CHD]; 1.0[JPT]
|
rs1533829
|
intron_variant |
0.817[TSI]
|
rs11770148
|
intron_variant; nc_transcript_variant |
1.0[CHB]
|
rs3996329
|
downstream_gene_variant; intron_variant |
1.0[CHB]; 1.0[JPT]
|
rs10276536
|
intron_variant |
0.817[TSI]
|
rs10267593
|
downstream_gene_variant; intron_variant |
1.0[CHB]; 0.927[CHD]
|
rs3996325
|
downstream_gene_variant; intron_variant |
0.844[TSI]
|
rs11764337
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.846[CHB]; 0.927[CHD]
|