ADHDgene Database

SNP Report

Basic Info

Name	rs11731185 dbSNP Ensembl
Location	chr4:177123850(Fwd)
Variant Alleles	A/C
Ancestral Allele	A
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Neale BM, 2010 (b)	A:C		GLM P-value=4.09E-06, meta-analysis P-value=0.03243 GLM P-value=4.09E-06, meta-analysis P-value=0.03243	One of the top 100 SNPs from imputed IMAGE II dataset One of the top 100 SNPs from imputed IMAGE II dataset	Trend

SNP related genes (count: 0)

SNPs in LD with rs11731185 (count: 8) View in gBrowse (chr4:177113836..177128689 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs1158472		0.817[CEU]; 0.938[CHB]; 0.867[CHD]; 1.0[JPT]
rs17672480		0.808[CEU]; 0.938[CHB]; 1.0[JPT]
rs7686009	upstream_gene_variant	0.975[TSI]; 1.0[CHB]; 0.963[CHD]; 1.0[JPT]; 0.826[LWK]; 0.85[MEX]; 0.863[MKK]
rs10004686	upstream_gene_variant	1.0[CHB]; 1.0[JPT]
rs6832177	downstream_gene_variant; synonymous_variant	0.822[CHB]; 0.879[JPT]
rs11734877		1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.827[YRI]
rs17062599	upstream_gene_variant	0.937[CHB]; 1.0[JPT]; 0.816[YRI]
rs728846		1.0[CHB]; 0.965[CHD]; 1.0[JPT]