ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs11689432 dbSNP Ensembl
Location chr2:239141505(Fwd)
Variant Alleles A/G
Ancestral Allele G
Functional Annotation intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000456601)
nc_transcript_variant(ENST00000456601)
upstream_gene_variant(ENST00000334973; ENST00000409070; ENST00000409376; ENST00000409942; ENST00000438457; ENST00000466075; ENST00000470346; ENST00000475669)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Brookes K, 2006 A/G UNPHASED TDT P-value=0.617; WHAP TDT P-value=0.022 UNPHASED TDT P-value=0.617; WHAP TDT P-value=0.022 significant association was observed in WHAP analysis significant association was observed in WHAP analysis Significant

SNP related genes (count: 0)

SNPs in LD with rs11689432 (count: 8) View in gBrowse (chr2:239141505..239202131 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 8)