ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1005270 dbSNP Ensembl
Location chr18:11750822(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000592770)
intron_variant(ENST00000334049)
upstream_gene_variant(ENST00000269162; ENST00000423027; ENST00000535121; ENST00000585642; ENST00000590228; ENST00000590972)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Laurin N, 2008(b) T/C TDT P-value=0.405, X2=0.695 TDT P-value=0.405, X2=0.695 no significant evidence of association no significant evidence of association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1005270 (count: 7) View in gBrowse (chr18:11746605..11761127 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 7)