ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	ZSCAN29
Previous Symbol	ZNF690
Symbol Alias	FLJ35867, Zfp690
Approved Name	zinc finger and SCAN domain containing 29
Previous Name	zinc finger protein 690
Location	15q15.3
Position	chr15:43650370-43662258, -
External Links	HGNC: 26673 Entrez Gene: 146050 Ensembl: ENSG00000140265 UCSC: uc001zrk.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by LD-proxy

Gene related studies (count: 0)

Gene related SNPs (count: 10)

Literature-origin SNPs (count: 0)

LD-proxies (count: 10)

rs_ID	Location	Functional Annotation
rs2412779	Chr15:43655927(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant
rs2899082	Chr15:43656043(Fwd)	3_prime_UTR_variant; NMD_transcript_variant; intron_variant
rs4075674	Chr15:43650230(Fwd)	downstream_gene_variant
rs2412780	Chr15:43655794(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant
rs10518812	Chr15:43652937(Fwd)	3_prime_UTR_variant; downstream_gene_variant
rs2278860	Chr15:43659046(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant
rs3809481	Chr15:43662829(Fwd)	5_prime_UTR_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant
rs6493085	Chr15:43654182(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant
rs17780920	Chr15:43662362(Fwd)	intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant
rs12912744	Chr15:43658935(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; missense_variant; stop_gained; upstream_gene_variant

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 6)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 0)

GO terms by database search (count: 6)

ID	Name	Type	No. of Genes in ADHDgene
GO:0016032	viral reproduction	Biological Process	57
GO:0008270	zinc ion binding	Molecular Function	323
GO:0003677	DNA binding	Molecular Function	220
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	132
GO:0005634	nucleus	Cellular Component	770
GO:0006351	transcription, DNA-dependent	Biological Process	247

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with ZSCAN29 (count: 20)

Gene Symbol	Pathway Count	Pathway List
ZNF215	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF24	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF263	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF287	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF396	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF397	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF483	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF75CP	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZSCAN30	6	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
HMGA1	5	viral reproduction; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF202	5	viral reproduction; zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus;
HINFP	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
IKZF1	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
MYT1L	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
SP4	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZFP37	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF169	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF189	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF367	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;
ZNF70	5	zinc ion binding; DNA binding; sequence-specific DNA binding transcription factor activity; nucleus; transcription, DNA-dependent;

Genes shared at least 2 KEGG pathways with ZSCAN29 (count: 0)

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Region: chr15:43650370..43662258 View in gBrowse