ADHDgene Database

Gene Report

Basic Info

Approved Symbol	PHF1
Symbol Alias	MTF2L2
Approved Name	PHD finger protein 1
Location	6p21.3
Position	chr6:33378176-33384230, +
External Links	HGNC: 8919 Entrez Gene: 5252 Ensembl: ENSG00000112511 UCSC: uc003oeh.2
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by LD-proxy

Gene related studies (count: 0)

Gene related SNPs (count: 1)

rs_ID	Location	Functional Annotation
rs442745	Chr6:33382241(Fwd)	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 7)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005634	nucleus	Cellular Component		770
GO:0005737	cytoplasm	Cellular Component		690
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	TAS[9545646]	132
GO:0008270	zinc ion binding	Molecular Function		323
GO:0016568	chromatin modification	Biological Process		16
GO:0005815	microtubule organizing center	Cellular Component		19
GO:0006351	transcription, DNA-dependent	Biological Process		247

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with PHF1 (count: 8)

Gene Symbol	Pathway Count	Pathway List
IKZF1	6	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; chromatin modification; transcription, DNA-dependent;
NCOR1	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; chromatin modification; transcription, DNA-dependent;
PRDM1	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; transcription, DNA-dependent;
TRIM22	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; transcription, DNA-dependent;
ZNF263	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; transcription, DNA-dependent;
ZNF367	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; transcription, DNA-dependent;
ZNF396	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; transcription, DNA-dependent;
ZNF397	5	nucleus; cytoplasm; sequence-specific DNA binding transcription factor activity; zinc ion binding; transcription, DNA-dependent;

Genes shared at least 2 KEGG pathways with PHF1 (count: 0)

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Region: chr6:33378176..33384230 View in gBrowse